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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
DNase-seq
75
ATAC-seq
64
single cell RNA-seq
56
total RNA-seq
42
ChIP-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
80
DNA accessibility
Date released
78
June, 2019
2
October, 2019
Available data
78
bam
78
bed bed3+
78
bed broadPeak
78
bed narrowPeak
78
bigBed broadPeak
78
bigBed narrowPeak
78
bigWig
Organism
80
Homo sapiens
Biosample type
68
tissue
12
primary cell
cell line
Organ
80
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
7
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
80
AMP
Genome assembly (visualization)
78
GRCh38
71
hg19
Lab
80
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
80 results
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DNase-seq
tissue
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
primary cell
kidney tubule cell
3
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
+ See 3 more…
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