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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
219
total RNA-seq
96
ATAC-seq
71
ChIP-seq
41
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
5
DNase-seq
5
single cell RNA-seq
2
Capture-C
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
5
DNA accessibility
Date released
4
June, 2019
1
October, 2019
Available data
8
bam
8
bed narrowPeak
8
bigBed narrowPeak
8
bigWig
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
fastq
Organism
5
Homo sapiens
Biosample type
4
tissue
1
cell line
Organ
81
kidney
36
limb
33
musculature of body
30
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
3
liver
2
nerve
2
vein
1
adipose tissue
Project
5
AMP
Genome assembly (visualization)
5
GRCh38
3
hg19
Lab
5
AMP-T2D consortium
files.file_type!
fastq
BIOSAMPLE
ASSAY
5 results
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DNase-seq
tissue
body of pancreas
2
pancreas
2
cell line
Panc1
1
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