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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
867
ChIP-seq
260
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
16
3D chromatin structure
4
DNA accessibility
Date released
7
March, 2020
6
July, 2019
2
August, 2021
1
August, 2017
1
March, 2019
1
November, 2018
1
November, 2019
1
October, 2019
Available data
11
hic
10
bedpe bed3+
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
2
fastq
1
bedpe
Organism
20
Homo sapiens
Biosample type
20
tissue
11
primary cell
4
cell line
4
in vitro differentiated cells
Organ
6
musculature of body
6
pancreas
4
limb
3
heart
2
kidney
1
blood vessel
1
brain
1
liver
1
vasculature
Project
20
AMP
Genome assembly (visualization)
15
hg19
Lab
17
AMP-T2D consortium
2
Bing Ren, UCSD
1
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
20 results
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Hi-C
FAIRE-seq
tissue
gastrocnemius medialis
4
islet of Langerhans
3
1
kidney
1
1
pancreas
1
1
psoas muscle
2
aorta
1
frontal cortex
1
heart
1
heart left ventricle
1
heart right ventricle
1
liver
1
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