Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
75
ATAC-seq
64
single cell RNA-seq
60
total RNA-seq
52
ChIP-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
1
3D chromatin structure
1
DNA accessibility
Date released
1
August, 2021
1
July, 2019
Available data
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
hic
Organism
2
Homo sapiens
Biosample type
2
tissue
Organ
11
pancreas
9
epithelium
6
blood vessel
6
musculature of body
6
vasculature
4
brain
4
limb
4
liver
3
heart
3
vein
2
kidney
1
connective tissue
Project
2
AMP
Genome assembly (visualization)
2
hg19
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
2 results
search-icon
table-tab-icon
Clear Filters
FAIRE-seq
Hi-C
tissue
kidney
1
1
Download