Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1769
ChIP-seq
1472
total RNA-seq
485
ATAC-seq
357
single cell RNA-seq
201
DNase-seq
87
RNA microarray
84
snATAC-seq
73
WGBS
56
pCHi-C
29
Hi-C
20
RRBS
18
small RNA-seq
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
4
DNA accessibility
1
Transcription
Date released
2
July, 2019
1
August, 2017
1
March, 2023
1
November, 2018
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
2
fastq
Organism
4
Homo sapiens
Biosample type
4
tissue
1
stem cell
Organ
2
pancreas
1
blood vessel
1
brain
1
epithelium
1
kidney
vasculature
1
vein
Project
4
AMP
1
community
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
1
Anna Gloyn, Oxford
organ_slims!
vasculature
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
FAIRE-seq
CRISPR RNA-seq
tissue
frontal cortex
1
islet of Langerhans
1
kidney
1
pancreas
1
stem cell
SB Ad3.1
1
Download