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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1552
ChIP-seq
1286
total RNA-seq
331
ATAC-seq
181
DNase-seq
176
single cell RNA-seq
87
RNA microarray
40
pCHi-C
28
WGBS
28
snATAC-seq
24
Hi-C
16
small RNA-seq
11
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
16
Transcription
Date released
16
July, 2019
5
January, 2018
Available data
21
bigWig
16
bam
16
tsv
5
fastq
Organism
21
Homo sapiens
Biosample type
16
tissue
4
in vitro differentiated cells
primary cell
1
stem cell
Organ
4
brain
3
liver
2
adipose tissue
2
connective tissue
2
pancreas
1
embryo
1
heart
1
kidney
1
musculature of body
Project
21
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
5
hg18
Lab
21
AMP-T2D consortium
biosample_type!
primary cell
BIOSAMPLE
ASSAY
21 results
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small RNA-seq
GRO-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 9 more…
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
See all biosamples
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