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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1350
ChIP-seq
1284
total RNA-seq
209
DNase-seq
136
ATAC-seq
100
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
5
GRO-seq
5
Hi-C
Assay category
209
DNA accessibility
Date released
187
June, 2019
9
November, 2018
8
October, 2019
5
January, 2018
4
August, 2017
1
November, 2020
Available data
214
bigWig
209
bam
209
bed narrowPeak
209
bigBed narrowPeak
206
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
17
fastq
Organism
214
Homo sapiens
Biosample type
177
tissue
29
primary cell
5
in vitro differentiated cells
2
cell line
1
stem cell
Organ
79
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
17
epithelium
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
embryo
1
spleen
Project
214
AMP
Genome assembly (visualization)
207
GRCh38
186
hg19
5
hg18
Lab
214
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
214 results
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DNase-seq
GRO-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 40 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
skeletal muscle myoblast
2
+ See 18 more…
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
stem cell
hESC
1
See all biosamples
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