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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
867
ChIP-seq
260
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
16
3D chromatin structure
Date released
84
February, 2021
7
March, 2020
4
July, 2019
3
August, 2021
2
December, 2019
1
March, 2019
1
November, 2019
1
October, 2019
Available data
84
txt
11
hic
10
bedpe bed3+
2
tsv
1
bedpe
Organism
102
Homo sapiens
Biosample type
103
tissue
10
primary cell
4
cell line
4
in vitro differentiated cells
Organ
84
bone element
6
musculature of body
4
limb
4
pancreas
3
heart
3
kidney
1
adipose tissue
1
blood vessel
1
connective tissue
1
epithelium
1
liver
1
vasculature
Project
103
AMP
Genome assembly (visualization)
11
hg19
Lab
100
AMP-T2D consortium
2
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
84
inconsistent ontology term
2
audit script error
BIOSAMPLE
ASSAY
103 results
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RNA microarray
Hi-C
tissue
bone element
84
gastrocnemius medialis
4
islet of Langerhans
3
psoas muscle
2
aorta
1
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