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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
907
ChIP-seq
260
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
174
Transcription
16
3D chromatin structure
Date released
108
August, 2021
47
September, 2023
9
April, 2020
7
March, 2020
6
February, 2021
4
July, 2019
3
May, 2023
1
December, 2019
1
February, 2023
1
March, 2019
1
May, 2022
1
November, 2019
1
October, 2019
Available data
103
tsv
13
txt
11
hic
10
bedpe bed3+
6
csv
1
bedpe
Organism
190
Homo sapiens
Biosample type
primary cell
190
tissue
6
in vitro differentiated cells
4
cell line
Organ
96
heart
65
kidney
9
lung
7
blood vessel
7
musculature of body
7
vasculature
4
limb
4
pancreas
2
artery
2
liver
Project
134
AMP
47
KPMP
9
LungMap
Genome assembly (visualization)
11
hg19
Lab
120
AMP-T2D consortium
47
KPMP
12
Katalin Susztak, Upenn
9
Xin Sun, UCSD
2
Bing Ren, UCSD
Audit category:
5
audit script error
biosample_type!
primary cell
BIOSAMPLE
ASSAY
190 results
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single cell RNA-seq
Hi-C
tissue
kidney
64
1
heart left ventricle
18
1
heart right ventricle
17
1
left cardiac atrium
18
right cardiac atrium
18
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