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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1578
ChIP-seq
1288
total RNA-seq
209
DNase-seq
175
ATAC-seq
100
single cell RNA-seq
18
WGBS
18
small RNA-seq
5
FAIRE-seq
1
pCHi-C
0
Hi-C
Assay category
100
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
3
August, 2018
3
July, 2019
3
June, 2018
Available data
205
tsv
129
fastq
105
bigWig
100
bam
52
zippedFastqFolder
23
hic
20
bedpe bed3+
13
txt
8
csv
5
bed bed3+
5
hdf5
3
cool
1
bedpe
Organism
100
Homo sapiens
Biosample type
100
primary cell
Organ
74
pancreas
70
epithelium
4
connective tissue
3
brain
Project
100
AMP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
100
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
100 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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