Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
Hi-C
Assay category
31
3D chromatin structure
Date released
10
March, 2020
8
July, 2019
5
October, 2019
3
August, 2021
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Available data
20
hic
17
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
1
bedpe
1
fastq
Organism
31
Homo sapiens
Biosample type
16
tissue
7
primary cell
4
cell line
4
in vitro differentiated cells
Organ
6
musculature of body
6
pancreas
5
blood vessel
5
epithelium
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Project
30
AMP
HPAP
1
ITG
Genome assembly (visualization)
24
hg19
2
GRCh38
Lab
26
AMP-T2D consortium
3
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
5
inconsistent ontology term
1
audit script error
Audit category:
1
inconsistent assembly
award.project!
HPAP
BIOSAMPLE
ASSAY
31 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
gastrocnemius medialis
4
islet of Langerhans
3
psoas muscle
2
aorta
1
heart
1
+ See 5 more…
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
chondrocytes
1
+ See 1 more…
cell line
HepG2
2
EndoC_BH1
1
Panc1
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
See all biosamples
Download