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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
256
ChIP-seq
245
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
25
DNase-seq
17
pCHi-C
9
RRBS
6
Hi-C
2
small RNA-seq
1
DNAme array
Assay category
6
3D chromatin structure
Date released
3
October, 2022
2
July, 2019
1
March, 2023
Available data
4
hic
3
bedpe bed3+
3
cool
2
bed bed3+
2
bigWig
2
hdf5
Organism
6
Homo sapiens
Biosample type
15
tissue
6
primary cell
4
cell line
4
in vitro differentiated cells
Organ
7
epithelium
4
blood vessel
vasculature
3
brain
3
pancreas
2
vein
1
connective tissue
1
liver
Project
3
HPAP
2
AMP
1
ITG
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
1
ITG
Audit category:
3
audit script error
organ_slims!
vasculature
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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