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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
262
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
29
DNase-seq
17
pCHi-C
10
RRBS
8
Hi-C
2
small RNA-seq
1
DNAme array
Assay category
8
3D chromatin structure
Date released
4
July, 2019
3
October, 2022
1
March, 2023
Available data
4
bed bed3+
4
bigWig
4
hdf5
4
hic
3
bedpe bed3+
3
cool
Organism
8
Homo sapiens
Biosample type
16
tissue
8
primary cell
4
cell line
4
in vitro differentiated cells
Organ
7
epithelium
4
blood vessel
4
vasculature
3
brain
3
pancreas
vein
1
connective tissue
1
liver
Project
4
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
7
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
ITG
Audit category:
3
audit script error
organ_slims!
vein
BIOSAMPLE
ASSAY
8 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
chondrocytes
1
endothelial cell of hepatic sinusoid
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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