Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
790
ChIP-seq
748
total RNA-seq
198
ATAC-seq
174
single cell RNA-seq
171
DNase-seq
87
RNA microarray
24
pCHi-C
23
WGBS
17
snATAC-seq
14
small RNA-seq
12
Hi-C
9
RRBS
3
snDrop-seq
2
FAIRE-seq
Assay category
748
Transcription
12
3D chromatin structure
Date released
444
February, 2021
143
May, 2020
50
August, 2021
33
July, 2019
24
February, 2020
23
October, 2019
20
May, 2022
12
March, 2020
8
February, 2023
2
May, 2021
1
May, 2023
Available data
660
tsv
632
bam
632
bigWig
53
txt
8
hic
7
bedpe bed3+
Organism
760
Homo sapiens
Biosample type
760
tissue
173
primary cell
140
in vitro differentiated cells
82
cell line
Organ
455
connective tissue
397
adipose tissue
pancreas
171
liver
62
bone element
51
kidney
19
eye
18
heart
17
brain
11
limb
11
musculature of body
8
blood vessel
8
vasculature
5
nerve
4
skeleton
2
artery
2
epithelium
1
spinal cord
Project
760
AMP
Genome assembly (visualization)
641
hg19
633
GRCh38
Lab
690
AMP-T2D consortium
50
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
Audit category:
1
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
760 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
Hi-C
tissue
adipose tissue
382
liver
167
1
bone tissue
58
kidney
49
1
islet of Langerhans
14
+ See 45 more…
See all biosamples
Download