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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
47
DNA accessibility
3
3D chromatin structure
2
DNA methylation
Date released
35
February, 2023
8
February, 2021
6
July, 2019
2
March, 2020
1
October, 2019
Available data
47
bed narrowPeak
12
bam
4
bigWig
3
bedpe bed3+
3
hic
2
bed bedMethyl
2
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
43
tissue
8
cell line
1
primary cell
Organ
163
pancreas
117
epithelium
80
kidney
52
heart
52
vasculature
51
blood vessel
45
artery
29
eye
29
liver
27
connective tissue
12
bone element
12
limb
12
musculature of body
12
skeleton
9
brain
6
adipose tissue
2
vein
1
blood
1
bodily fluid
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
spleen
Project
52
AMP
Genome assembly (visualization)
47
GRCh38
17
hg19
Lab
52
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
Hi-C
RRBS
tissue
coronary artery
36
heart left ventricle
2
1
1
heart
1
heart right ventricle
1
right atrium auricular region
1
cell line
smooth muscle cell of the coronary artery
8
primary cell
cardiac fibroblast
1
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