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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
752
ChIP-seq
268
total RNA-seq
94
single cell RNA-seq
78
ATAC-seq
72
DNase-seq
14
WGBS
11
Hi-C
6
pCHi-C
4
RRBS
4
small RNA-seq
2
STARR-seq
1
whole genome sequencing assay
Assay category
11
3D chromatin structure
Date released
5
July, 2019
3
March, 2020
1
August, 2021
1
December, 2018
1
October, 2019
Available data
5
bedpe bed3+
5
hic
1
bed bed3+
1
bigWig
1
fastq
1
hdf5
Organism
11
Homo sapiens
Biosample type
8
tissue
2
cell line
1
primary cell
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Project
11
AMP
Genome assembly (visualization)
6
hg19
Lab
10
AMP-T2D consortium
1
Bing Ren, UCSD
BIOSAMPLE
ASSAY
11 results
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Hi-C
tissue
gastrocnemius medialis
4
heart
1
heart left ventricle
1
heart right ventricle
1
liver
1
cell line
HepG2
2
primary cell
endothelial cell of hepatic sinusoid
1
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