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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
569
ChIP-seq
189
total RNA-seq
23
ATAC-seq
8
DNase-seq
6
Hi-C
5
WGBS
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
FAIRE-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
6
3D chromatin structure
Date released
2
March, 2020
1
August, 2021
1
December, 2018
1
July, 2019
1
October, 2019
Available data
4
hic
3
bedpe bed3+
1
bed bed3+
1
bigWig
1
fastq
1
hdf5
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
cell line
1
tissue
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Project
6
AMP
Genome assembly (visualization)
5
hg19
Lab
5
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
cell line
HepG2
2
tissue
liver
1
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