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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
115
total RNA-seq
34
ATAC-seq
18
snATAC-seq
17
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
0
FAIRE-seq
Assay category
154
DNA binding
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
154
May, 2021
2
February, 2023
Available data
117
bigWig
114
bed narrowPeak
84
bam
84
tagAlign
Organism
156
Homo sapiens
Biosample type
117
primary cell
37
in vitro differentiated cells
2
cell line
Project
86
T1D
70
AMP
Genome assembly (visualization)
117
hg19
84
GRCh38
Lab
1664
AMP-T2D consortium
156
Kyle Gaulton, UCSD
40
Patrick T. Ellinor, Broad
18
Bing Ren, UCSD
BIOSAMPLE
ASSAY
156 results
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ChIP-seq
HiChIP
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
33
in vitro differentiated cells
embryonic stem cell
37
cell line
EndoC_BH1
2
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