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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1031
total RNA-seq
907
ChIP-seq
260
ATAC-seq
180
single cell RNA-seq
178
DNase-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
0
MPRA
Assay category
28
DNA accessibility
11
DNA methylation
Date released
10
April, 2020
8
January, 2021
6
August, 2021
6
July, 2019
5
August, 2017
2
February, 2023
1
August, 2022
1
May, 2022
Available data
9
bed bedMethyl
9
bigBed bedMethyl
3
fastq
1
bed bed3+
1
txt
Organism
38
Homo sapiens
Biosample type
66
primary cell
39
tissue
1
cell line
Organ
13
pancreas
10
lung
7
kidney
5
musculature of body
1
brain
1
heart
1
liver
1
pericardium
Project
19
AMP
10
LungMap
10
T1D
Genome assembly (visualization)
10
hg19
Lab
13
AMP-T2D consortium
10
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
Audit category:
2
audit script error
BIOSAMPLE
ASSAY
39 results
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snATAC-seq
RRBS
tissue
lung
10
islet of Langerhans
7
1
kidney
6
1
pancreas
4
1
skeletal muscle tissue
1
4
brain
1
heart left ventricle
1
liver
1
pericardium
1
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