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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
9
DNase-seq
ATAC-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
0
MeRIP-seq
Assay category
85
DNA binding
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
12
histone
12
histone modification
10
broad histone mark
9
control
7
chromatin remodeller
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
10
November, 2020
8
February, 2021
6
September, 2017
3
March, 2020
Available data
79
fastq
78
bam
69
bed narrowPeak
69
bigBed narrowPeak
69
bigWig
14
tagAlign
3
bed broadPeak
Organism
85
Homo sapiens
Biosample type
60
cell line
25
tissue
Organ
49
liver
15
blood
15
bodily fluid
15
brain
6
spleen
Project
85
AMP
Genome assembly (visualization)
69
GRCh38
67
hg19
Lab
85
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
cell line
HepG2
45
GM12878
15
tissue
brain
15
spleen
6
liver
4
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