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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
53
ChIP-seq
ATAC-seq
6
WGBS
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
0
MeRIP-seq
Assay category
53
DNA binding
Target of assay
32
histone
32
histone modification
24
control
broad histone mark
17
transcription factor
12
narrow histone mark
5
RNA binding protein
Date released
30
August, 2017
23
October, 2018
Available data
37
bam
37
fastq
19
bigWig
7
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
4
tagAlign
1
bed broadPeak
Organism
53
Homo sapiens
Biosample type
53
tissue
Organ
510
liver
150
pancreas
148
brain
109
connective tissue
91
epithelium
77
heart
60
blood
60
bodily fluid
57
vasculature
54
blood vessel
53
adipose tissue
37
kidney
32
limb
20
artery
19
musculature of body
19
nerve
18
embryo
16
spleen
8
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
53
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
12
missing controlled_by
assay_title!
ATAC-seq
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
16
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
2
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