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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
493
total RNA-seq
158
ChIP-seq
53
ATAC-seq
13
DNase-seq
9
pCHi-C
6
WGBS
4
single cell RNA-seq
3
small RNA-seq
Capture-C
2
RRBS
1
Hi-C
1
RNA microarray
0
MeRIP-seq
Date released
4
October, 2019
2
March, 2020
1
August, 2018
1
February, 2021
1
May, 2021
Available data
2
tsv
1
bam
1
bed bed3+
1
bedpe bed3+
1
fastq
Organism
9
Homo sapiens
Biosample type
5
tissue
2
primary cell
1
in vitro differentiated cells
1
stem cell
Organ
11
pancreas
6
epithelium
5
connective tissue
4
eye
3
heart
3
liver
2
adipose tissue
2
brain
2
intestine
2
kidney
2
thymus
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
musculature of body
1
ovary
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Project
8
AMP
1
T1D
Genome assembly (visualization)
1
hg19
Lab
8
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
Capture-C
BIOSAMPLE
ASSAY
9 results
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pCHi-C
tissue
islet of Langerhans
4
adipose tissue
1
primary cell
adult endothelial progenitor cell
1
osteoblast
1
in vitro differentiated cells
white fat cell
1
stem cell
mesenchymal stem cell
1
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