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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
484
ChIP-seq
113
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA sequencing
Target of assay
3
control
3
nucleotide modification
Date released
6
November, 2020
1
August, 2021
Available data
1
vcf
Organism
7
Homo sapiens
Biosample type
7
cell line
4
tissue
Organ
6
epithelium
6
pancreas
1
liver
Project
7
AMP
Lab
6
Rohit N. Kulkarni, M.D., Ph.D.
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
assay_title!
Capture-C
BIOSAMPLE
ASSAY
7 results
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MeRIP-seq
whole genome sequencing assay
cell line
EndoC_BH1
6
HepG2
1
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