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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1702
ChIP-seq
1402
total RNA-seq
428
ATAC-seq
293
single cell RNA-seq
193
DNase-seq
86
RNA microarray
84
snATAC-seq
57
pCHi-C
28
WGBS
26
Hi-C
18
small RNA-seq
15
RRBS
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Target of assay
2
control
2
nucleotide modification
Date released
84
February, 2021
4
November, 2020
1
August, 2021
1
December, 2019
Available data
84
txt
1
tsv
Organism
89
Homo sapiens
Biosample type
90
tissue
Organ
84
bone element
10
pancreas
epithelium
2
kidney
1
adipose tissue
1
connective tissue
Project
90
AMP
Lab
86
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
84
inconsistent ontology term
1
audit script error
assay_title!
Capture-C
organ_slims!
epithelium
BIOSAMPLE
ASSAY
90 results
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RNA microarray
MeRIP-seq
tissue
bone element
84
islet of Langerhans
4
kidney interstitium
1
subcutaneous adipose tissue
1
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