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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
129
ChIP-seq
103
ATAC-seq
70
single cell RNA-seq
47
WGBS
19
DNase-seq
8
Hi-C
6
MeRIP-seq
6
RRBS
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
47
DNA methylation
Target of assay
3
control
3
nucleotide modification
Date released
41
May, 2022
6
February, 2021
6
November, 2020
Available data
41
zippedFastqFolder
6
fastq
6
tsv
Organism
53
Homo sapiens
Biosample type
47
primary cell
6
cell line
Organ
61
pancreas
53
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
47
HPAP
6
AMP
Lab
47
Klaus Kaestner, Upenn
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_title!
STARR-seq
BIOSAMPLE
ASSAY
53 results
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WGBS
MeRIP-seq
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cell line
EndoC_BH1
6
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