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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1391
ChIP-seq
1284
total RNA-seq
352
ATAC-seq
209
DNase-seq
100
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
5
GRO-seq
5
Hi-C
0
MeRIP-seq
Assay category
209
DNA accessibility
17
DNA methylation
Date released
187
June, 2019
16
November, 2018
8
July, 2019
8
October, 2019
6
August, 2017
1
November, 2020
Available data
227
bam
226
bigWig
209
bed narrowPeak
209
bigBed narrowPeak
206
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
41
zippedFastqFolder
29
fastq
17
bed bedMethyl
17
bigBed bedMethyl
6
tsv
Organism
226
Homo sapiens
Biosample type
193
tissue
29
primary cell
3
cell line
1
in vitro differentiated cells
Organ
79
kidney
37
limb
36
heart
34
musculature of body
32
brain
18
ureter
17
epithelium
12
pancreas
12
vasculature
11
connective tissue
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
spleen
2
nerve
2
vein
Project
226
AMP
Genome assembly (visualization)
224
GRCh38
186
hg19
Lab
226
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
226 results
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Clear Filters
DNase-seq
WGBS
tissue
heart
18
1
muscle of arm
17
brain
14
muscle of leg
13
1
kidney
13
+ See 43 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
skeletal muscle myoblast
2
+ See 18 more…
cell line
HepG2
1
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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