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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1031
total RNA-seq
722
ChIP-seq
260
ATAC-seq
180
single cell RNA-seq
178
DNase-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
3
snDrop-seq
2
MeRIP-seq
Assay category
38
DNA methylation
Target of assay
control
2
nucleotide modification
Date released
18
July, 2019
14
August, 2017
6
November, 2018
2
November, 2020
Available data
25
bed bedMethyl
25
bigBed bedMethyl
17
bam
16
bigWig
13
fastq
Organism
40
Homo sapiens
Biosample type
57
primary cell
40
tissue
4
cell line
Organ
9
heart
8
pancreas
6
adipose tissue
6
connective tissue
5
liver
5
musculature of body
2
blood vessel
2
spleen
2
vasculature
1
brain
1
kidney
1
limb
1
pericardium
Project
40
AMP
Genome assembly (visualization)
16
GRCh38
9
hg19
Lab
38
AMP-T2D consortium
2
Rohit N. Kulkarni, M.D., Ph.D.
target.investigated_as!
control
BIOSAMPLE
ASSAY
40 results
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WGBS
RRBS
MeRIP-seq
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
islet of Langerhans
1
2
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