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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1347
ChIP-seq
1328
total RNA-seq
453
ATAC-seq
278
single cell RNA-seq
210
DNase-seq
87
RNA microarray
51
pCHi-C
36
snATAC-seq
27
Hi-C
27
WGBS
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
3
snDrop-seq
2
Capture-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
Assay category
27
DNA methylation
Target of assay
2
control
2
nucleotide modification
Date released
12
July, 2019
9
August, 2017
6
November, 2018
4
November, 2020
Available data
17
bam
16
bed bedMethyl
16
bigBed bedMethyl
16
bigWig
10
fastq
Organism
31
Homo sapiens
Biosample type
31
tissue
cell line
Organ
8
heart
8
pancreas
6
adipose tissue
6
connective tissue
4
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
HPAP
31
AMP
Genome assembly (visualization)
16
GRCh38
Lab
27
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
biosample_type!
cell line
award.project!
HPAP
BIOSAMPLE
ASSAY
31 results
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WGBS
MeRIP-seq
tissue
heart left ventricle
4
islet of Langerhans
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
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