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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
934
total RNA-seq
647
ChIP-seq
231
ATAC-seq
174
single cell RNA-seq
168
DNase-seq
87
RNA microarray
28
snATAC-seq
25
pCHi-C
17
WGBS
16
Hi-C
16
small RNA-seq
8
RRBS
4
MeRIP-seq
3
snDrop-seq
2
FAIRE-seq
Assay category
17
DNA methylation
Target of assay
2
control
2
nucleotide modification
Date released
12
July, 2019
5
August, 2017
4
November, 2020
Available data
17
bam
16
bed bedMethyl
16
bigBed bedMethyl
16
bigWig
fastq
Organism
21
Homo sapiens
Biosample type
41
primary cell
21
tissue
6
cell line
Organ
8
heart
4
pancreas
3
adipose tissue
3
connective tissue
3
liver
2
blood vessel
2
vasculature
1
limb
1
musculature of body
Project
21
AMP
Genome assembly (visualization)
8
GRCh38
Lab
17
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
files.file_type!
fastq
BIOSAMPLE
ASSAY
21 results
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WGBS
MeRIP-seq
tissue
heart left ventricle
4
islet of Langerhans
4
subcutaneous abdominal adipose tissue
3
aorta
2
heart right ventricle
2
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