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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1006
total RNA-seq
867
ChIP-seq
254
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
25
pCHi-C
15
WGBS
12
Hi-C
5
RRBS
4
MeRIP-seq
3
snDrop-seq
2
FAIRE-seq
Assay category
15
DNA methylation
Target of assay
2
control
2
nucleotide modification
Date released
July, 2019
9
August, 2017
6
November, 2018
4
November, 2020
Available data
10
fastq
8
bam
8
bed bedMethyl
8
bigBed bedMethyl
8
bigWig
Organism
19
Homo sapiens
Biosample type
47
primary cell
19
tissue
7
cell line
Organ
8
pancreas
6
adipose tissue
6
connective tissue
3
liver
2
spleen
Project
19
AMP
Genome assembly (visualization)
8
GRCh38
Lab
15
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
month_released!
July, 2019
BIOSAMPLE
ASSAY
19 results
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WGBS
MeRIP-seq
tissue
islet of Langerhans
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
body of pancreas
2
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