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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
518
ChIP-seq
262
single cell RNA-seq
203
ATAC-seq
175
total RNA-seq
87
RNA microarray
72
snATAC-seq
55
pCHi-C
18
Hi-C
14
RRBS
11
WGBS
5
DNase-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
0
MeRIP-seq
Assay category
11
DNA methylation
Date released
7
August, 2017
4
July, 2019
Available data
2
fastq
1
bam
Organism
11
Homo sapiens
Biosample type
11
tissue
Organ
pancreas
53
epithelium
4
adipose tissue
4
connective tissue
4
liver
2
heart
1
blood vessel
1
vasculature
Project
11
AMP
Genome assembly (visualization)
GRCh38
Lab
11
AMP-T2D consortium
organ_slims!
musculature of body
pancreas
assembly!
GRCh38
BIOSAMPLE
ASSAY
11 results
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WGBS
tissue
liver
3
subcutaneous abdominal adipose tissue
3
heart left ventricle
2
adipose tissue
1
aorta
1
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