Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1639
ChIP-seq
1247
total RNA-seq
342
ATAC-seq
211
DNase-seq
211
single cell RNA-seq
87
RNA microarray
39
pCHi-C
26
Hi-C
26
WGBS
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
0
MeRIP-seq
Assay category
26
DNA methylation
Date released
12
July, 2019
9
August, 2017
5
November, 2018
Available data
16
bam
15
bed bedMethyl
15
bigBed bedMethyl
15
bigWig
9
fastq
Organism
26
Homo sapiens
Biosample type
25
tissue
1
cell line
Organ
8
heart
6
adipose tissue
6
connective tissue
5
liver
4
pancreas
2
blood vessel
spleen
2
vasculature
1
limb
1
musculature of body
Project
26
AMP
Genome assembly (visualization)
15
GRCh38
Lab
47
Klaus Kaestner, Upenn
26
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
organ_slims!
spleen
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
WGBS
tissue
heart left ventricle
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
aorta
2
+ See 7 more…
cell line
HepG2
1
See all biosamples
Download