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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
155
ChIP-seq
52
total RNA-seq
37
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
0
MeRIP-seq
Assay category
37
DNA accessibility
2
Transcription
Date released
12
August, 2021
12
February, 2023
May, 2021
5
November, 2019
4
February, 2021
4
October, 2019
2
December, 2019
Available data
21
bed narrowPeak
17
bam
7
bed bedgraph
7
bigWig
5
bed bed3
4
bed bed3+
3
txt
2
bigBed narrowPeak
2
tsv
Organism
39
Homo sapiens
Biosample type
438
tissue
374
primary cell
39
in vitro differentiated cells
19
cell line
Organ
17
connective tissue
Project
39
AMP
Genome assembly (visualization)
37
hg19
17
GRCh38
Lab
34
AMP-T2D consortium
5
Struan F.A. Grant, CHOP
Audit category:
12
inconsistent ontology term
2
audit script error
month_released!
May, 2021
BIOSAMPLE
ASSAY
39 results
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ATAC-seq
single cell RNA-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
8
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
cardiomyocytes (cardiac muscle cell)
1
2
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