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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
ChIP-seq
136
total RNA-seq
42
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
0
MeRIP-seq
Assay category
42
DNA accessibility
2
Transcription
Date released
12
August, 2021
12
February, 2023
5
May, 2021
5
November, 2019
4
February, 2021
4
October, 2019
2
December, 2019
Available data
21
bed narrowPeak
17
bam
12
bigWig
7
bed bedgraph
5
bed bed3
4
bed bed3+
3
txt
2
bigBed narrowPeak
2
tsv
Organism
44
Homo sapiens
Biosample type
438
tissue
387
primary cell
44
in vitro differentiated cells
34
cell line
Organ
17
connective tissue
Project
44
AMP
Genome assembly (visualization)
42
hg19
17
GRCh38
Lab
34
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
12
inconsistent ontology term
2
audit script error
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
44 results
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ATAC-seq
single cell RNA-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
8
embryonic stem cell
6
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
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