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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
857
ChIP-seq
243
total RNA-seq
128
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
0
MeRIP-seq
Assay category
128
Transcription
27
DNA accessibility
Date released
48
July, 2018
39
February, 2021
38
April, 2018
22
September, 2020
3
August, 2018
3
June, 2018
1
November, 2018
1
September, 2018
Available data
205
tsv
155
fastq
100
bam
100
bigWig
73
zippedFastqFolder
14
txt
8
csv
1
bed bed3+
Organism
155
Homo sapiens
Biosample type
155
primary cell
Organ
69
pancreas
66
epithelium
3
connective tissue
Project
94
AMP
61
HPAP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
94
AMP-T2D consortium
61
Klaus Kaestner, Upenn
Audit category:
27
audit script error
7
inconsistent ontology term
BIOSAMPLE
ASSAY
155 results
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single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
34
27
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic acinar cell
9
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