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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
139
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
0
MeRIP-seq
Assay category
139
Transcription
Target of assay
3
control
Date released
July, 2018
43
April, 2018
40
September, 2020
33
May, 2022
12
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
1
November, 2018
1
September, 2018
Available data
80
fastq
52
bam
52
bigWig
52
tsv
52
zippedFastqFolder
2
csv
Organism
139
Homo sapiens
Biosample type
178
tissue
139
primary cell
6
cell line
2
in vitro differentiated cells
Organ
37
epithelium
37
pancreas
3
brain
2
connective tissue
Project
85
HPAP
54
AMP
Genome assembly (visualization)
52
GRCh38
52
hg19
Lab
85
Klaus Kaestner, Upenn
54
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2018
BIOSAMPLE
ASSAY
139 results
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single cell RNA-seq
primary cell
Langerhans cell
85
pancreatic acinar cell
7
pancreatic delta cell
7
pancreatic ductal cell
7
pancreatic cell
6
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