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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
218
ChIP-seq
32
DNase-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
0
MeRIP-seq
Assay category
32
DNA accessibility
3
Transcription
Target of assay
3
control
Date released
30
June, 2019
3
July, 2019
2
November, 2018
Available data
35
bam
35
bigWig
32
bed bed3+
32
bed broadPeak
32
bed narrowPeak
32
bigBed broadPeak
32
bigBed narrowPeak
3
tsv
2
fastq
Organism
35
Homo sapiens
Biosample type
27
tissue
8
primary cell
Organ
145
kidney
123
heart
62
epithelium
59
pancreas
36
limb
35
brain
34
musculature of body
18
ureter
17
vasculature
15
blood vessel
11
connective tissue
9
lung
7
liver
6
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
35
AMP
Genome assembly (visualization)
35
GRCh38
25
hg19
Lab
35
AMP-T2D consortium
month_released!
April, 2018
BIOSAMPLE
ASSAY
35 results
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DNase-seq
single cell RNA-seq
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
+ See 2 more…
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