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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1546
ChIP-seq
1262
total RNA-seq
209
DNase-seq
161
ATAC-seq
100
single cell RNA-seq
18
WGBS
18
small RNA-seq
5
FAIRE-seq
1
pCHi-C
0
MeRIP-seq
Assay category
100
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
3
August, 2018
3
July, 2019
3
June, 2018
1
February, 2021
Available data
236
tsv
128
fastq
101
bam
100
bigWig
52
zippedFastqFolder
13
txt
7
csv
3
bedpe bed3+
2
bed bed3+
2
ibed
Organism
101
Homo sapiens
Biosample type
101
primary cell
Organ
74
pancreas
70
epithelium
5
connective tissue
3
brain
Project
101
AMP
Genome assembly (visualization)
101
hg19
100
GRCh38
Lab
101
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
month_released!
September, 2018
BIOSAMPLE
ASSAY
101 results
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single cell RNA-seq
pCHi-C
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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