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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1249
total RNA-seq
113
single cell RNA-seq
28
pCHi-C
17
small RNA-seq
14
ATAC-seq
6
WGBS
3
snDrop-seq
2
RNA microarray
0
MeRIP-seq
Assay category
113
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
6
August, 2021
5
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
2
December, 2019
Available data
128
fastq
113
tsv
100
bam
100
bigWig
52
zippedFastqFolder
13
txt
8
csv
Organism
113
Homo sapiens
Biosample type
100
primary cell
11
tissue
2
in vitro differentiated cells
Organ
heart
74
pancreas
70
epithelium
6
blood vessel
6
vasculature
5
kidney
4
connective tissue
3
brain
2
artery
Project
113
AMP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
113
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
7
audit script error
organ_slims!
heart
BIOSAMPLE
ASSAY
113 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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tissue
kidney
5
aorta
4
pulmonary artery
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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