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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
129
ChIP-seq
103
ATAC-seq
47
WGBS
37
single cell RNA-seq
19
DNase-seq
8
Hi-C
6
MeRIP-seq
6
RRBS
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
37
Transcription
Target of assay
3
control
3
nucleotide modification
Date released
April, 2018
33
July, 2018
6
November, 2020
3
August, 2018
1
June, 2018
Available data
37
bam
37
bigWig
37
fastq
37
tsv
Organism
43
Homo sapiens
Biosample type
37
primary cell
6
cell line
Organ
93
heart
64
kidney
51
pancreas
43
epithelium
9
lung
6
blood vessel
6
vasculature
3
brain
2
artery
2
connective tissue
1
liver
1
musculature of body
Project
43
AMP
Genome assembly (visualization)
37
GRCh38
37
hg19
Lab
37
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
7
inconsistent ontology term
month_released!
April, 2018
BIOSAMPLE
ASSAY
43 results
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single cell RNA-seq
MeRIP-seq
primary cell
pancreatic alpha cell
9
pancreatic beta cell
9
pancreatic acinar cell
6
pancreatic delta cell
4
pancreatic ductal cell
4
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cell line
EndoC_BH1
6
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