Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
    • Citing CMDGA

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1831ChIP-seq
  • 1533total RNA-seq
  • 531ATAC-seq
  • 316single cell RNA-seq
  • 212DNase-seq
  • 87RNA microarray
  • 84snATAC-seq
  • 75WGBS
  • 57pCHi-C
  • 30Hi-C
  • 21RRBS
  • 18small RNA-seq
  • 10MeRIP-seq
  • 5FAIRE-seq
  • 5GRO-seq
  • 5STARR-seq
  • 4Capture-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 3snDrop-seq
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1CRISPRi RNA-seq
  • 1DNAme array
  • 1MPRA
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Date released
  • 84February, 2021
  • 2December, 2019
  • 1August, 2021
Available data
  • 84txt
  • 2tsv
Organism
  • 86Homo sapiens
Biosample type
  • 87tissue
Organ
  • 84bone element
  • 2kidney
  • 1adipose tissue
  • 1connective tissue
  • 1epithelium
Project
  • 87AMP
Lab
  • 87AMP-T2D consortium
Audit category:
  • 84inconsistent ontology term
  • 2audit script error
BIOSAMPLE
ASSAY

87 results

search-icontable-tab-icon
Clear Filters
RNA microarray
tissue
bone element84
kidney interstitium1
renal glomerulus1
subcutaneous adipose tissue1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2023 Regents of the University of California.

  • UC San Diego