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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
867
ChIP-seq
260
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
28
DNA accessibility
Date released
84
February, 2021
10
April, 2020
8
January, 2021
7
August, 2021
2
December, 2019
2
February, 2023
1
August, 2022
1
May, 2022
Available data
85
txt
2
tsv
1
bed bed3+
Organism
113
Homo sapiens
Biosample type
115
tissue
56
primary cell
Organ
84
bone element
11
pancreas
10
lung
8
kidney
1
adipose tissue
1
connective tissue
1
epithelium
1
musculature of body
Project
95
AMP
10
LungMap
10
T1D
Genome assembly (visualization)
1
hg19
Lab
89
AMP-T2D consortium
10
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
Audit category:
84
inconsistent ontology term
4
audit script error
BIOSAMPLE
ASSAY
115 results
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RNA microarray
snATAC-seq
tissue
bone element
84
lung
10
islet of Langerhans
7
kidney
6
pancreas
4
kidney interstitium
1
renal glomerulus
1
skeletal muscle tissue
1
subcutaneous adipose tissue
1
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