Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
964
ChIP-seq
496
total RNA-seq
271
ATAC-seq
189
single cell RNA-seq
56
snATAC-seq
48
WGBS
34
DNase-seq
32
pCHi-C
18
Hi-C
10
RRBS
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
FAIRE-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
10
DNA methylation
Date released
9
July, 2019
5
January, 2018
1
August, 2017
Available data
10
bed bedMethyl
10
bigBed bedMethyl
6
fastq
5
bigWig
Organism
15
Homo sapiens
Biosample type
tissue
10
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
6
epithelium
3
kidney
1
brain
1
connective tissue
1
embryo
1
eye
1
heart
1
liver
1
musculature of body
1
vasculature
Project
15
AMP
Genome assembly (visualization)
10
hg19
5
hg18
Lab
15
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
RRBS
GRO-seq
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
See all biosamples
Download