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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
0
snATAC-seq
Assay category
11
DNA accessibility
1
DNA methylation
Date released
7
June, 2019
4
October, 2019
1
July, 2019
Available data
11
bam
11
bed bed3+
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
11
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
12
Homo sapiens
Biosample type
7
primary cell
5
tissue
Organ
91
kidney
39
musculature of body
36
limb
34
brain
32
heart
25
epithelium
21
pancreas
18
ureter
12
vasculature
10
connective tissue
10
lung
9
blood vessel
8
blood
8
bodily fluid
8
liver
5
eye
4
artery
2
adipose tissue
2
nerve
2
vein
1
pericardium
1
spleen
Project
12
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
12 results
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DNase-seq
RRBS
primary cell
choroid plexus epithelial cell
1
1
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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