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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
218
ChIP-seq
152
ATAC-seq
80
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
0
whole genome sequencing assay
Assay category
11
DNA accessibility
2
DNA methylation
Date released
8
January, 2021
2
February, 2023
2
July, 2019
1
August, 2022
Available data
2
bed bedMethyl
2
bigBed bedMethyl
Organism
13
Homo sapiens
Biosample type
13
tissue
Organ
13
pancreas
10
kidney
10
lung
8
blood
8
bodily fluid
6
epithelium
6
musculature of body
3
liver
2
brain
2
heart
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
10
T1D
3
AMP
Genome assembly (visualization)
2
hg19
Lab
10
Kyle Gaulton, UCSD
3
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
13 results
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snATAC-seq
RRBS
tissue
islet of Langerhans
7
1
pancreas
4
1
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