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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
total RNA-seq
84
RNA microarray
59
ChIP-seq
42
ATAC-seq
9
pCHi-C
9
single cell RNA-seq
6
MeRIP-seq
5
Hi-C
4
DNase-seq
2
Capture-C
2
RRBS
1
STARR-seq
Assay category
5
3D chromatin structure
2
DNA methylation
Date released
2
July, 2019
2
March, 2020
2
October, 2019
1
November, 2019
Available data
5
bedpe bed3+
5
hic
2
bed bedMethyl
2
bigBed bedMethyl
Organism
7
Homo sapiens
Biosample type
4
in vitro differentiated cells
2
primary cell
1
cell line
Organ
2
epithelium
1
connective tissue
1
heart
1
kidney
1
pancreas
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
7
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
4
audit script error
BIOSAMPLE
ASSAY
7 results
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Hi-C
RRBS
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
cardiac fibroblast
1
epithelial cell of proximal tubule
1
cell line
EndoC_BH1
1
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