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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1523
ChIP-seq
1281
total RNA-seq
330
ATAC-seq
175
single cell RNA-seq
149
DNase-seq
87
RNA microarray
39
pCHi-C
27
WGBS
27
snATAC-seq
18
Hi-C
15
small RNA-seq
10
MeRIP-seq
7
RRBS
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
7
DNA methylation
Date released
6
July, 2019
1
August, 2017
Available data
7
bed bedMethyl
7
bigBed bedMethyl
1
fastq
Organism
7
Homo sapiens
Biosample type
primary cell
7
tissue
Organ
musculature of body
2
pancreas
1
brain
1
heart
1
kidney
1
liver
1
pericardium
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
7
AMP-T2D consortium
biosample_type!
primary cell
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
7 results
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RRBS
tissue
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
liver
1
+ See 2 more…
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