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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
218
ChIP-seq
32
DNase-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
Assay category
32
DNA accessibility
2
DNA methylation
Date released
30
June, 2019
2
July, 2019
2
November, 2018
Available data
32
bam
32
bed bed3+
32
bed broadPeak
32
bed narrowPeak
32
bigBed broadPeak
32
bigBed narrowPeak
32
bigWig
2
bed bedMethyl
2
bigBed bedMethyl
2
fastq
Organism
34
Homo sapiens
Biosample type
28
tissue
6
primary cell
Organ
85
kidney
38
musculature of body
36
limb
34
brain
32
heart
25
epithelium
18
ureter
12
vasculature
10
connective tissue
10
pancreas
9
blood vessel
8
liver
5
eye
4
artery
2
adipose tissue
2
nerve
2
vein
1
pericardium
1
spleen
Project
34
AMP
Genome assembly (visualization)
32
GRCh38
24
hg19
Lab
34
AMP-T2D consortium
BIOSAMPLE
ASSAY
34 results
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DNase-seq
RRBS
tissue
brain
14
1
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
choroid plexus epithelial cell
1
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
See all biosamples
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