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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
23
DNA accessibility
2
DNA methylation
Date released
20
May, 2022
2
August, 2017
1
February, 2021
1
July, 2019
1
October, 2019
Available data
23
bed narrowPeak
21
bigWig
3
bam
2
bed bedMethyl
2
bigBed bedMethyl
2
fastq
1
bed bed3
1
bigBed narrowPeak
Organism
25
Homo sapiens
Biosample type
22
tissue
2
primary cell
1
cell line
Organ
154
pancreas
109
epithelium
79
kidney
49
heart
47
vasculature
46
blood vessel
45
artery
29
eye
26
connective tissue
25
liver
12
bone element
12
skeleton
8
limb
6
adipose tissue
6
brain
6
musculature of body
1
blood
1
bodily fluid
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
spleen
Project
25
AMP
Genome assembly (visualization)
25
hg19
3
GRCh38
Lab
20
Karen Mohlke, UNC
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
RRBS
tissue
liver
20
1
right lobe of liver
1
primary cell
Liver fetal (hepatocyte)
1
hepatocyte
1
cell line
HepG2
1
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