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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
403
total RNA-seq
218
ChIP-seq
152
ATAC-seq
74
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
74
Transcription
2
DNA methylation
Date released
37
July, 2018
33
April, 2018
3
August, 2018
2
July, 2019
1
June, 2018
Available data
74
bam
74
bigWig
74
tsv
69
fastq
2
bed bedMethyl
2
bigBed bedMethyl
Organism
76
Homo sapiens
Biosample type
74
primary cell
2
tissue
Organ
95
heart
76
epithelium
76
pancreas
68
kidney
9
lung
7
vasculature
6
blood vessel
6
musculature of body
5
brain
5
connective tissue
3
liver
2
artery
1
eye
1
pericardium
Project
76
AMP
Genome assembly (visualization)
76
hg19
74
GRCh38
Lab
76
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
76 results
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single cell RNA-seq
RRBS
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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tissue
islet of Langerhans
1
pancreas
1
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